Lucas Bourneuf

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Education

2016-2019 (expected)

PhD, Computer Science; Université de Rennes 1

Thesis title: Justifiable graph decomposition to assist biological network understanding supervisor: Dr. Jacques Nicolas

2014-2016

Master Bioinformatique et Génomique; Université de Rennes 1 (rank=3/36)

2011-2014

Licence informatique; Université du Maine (Le Mans) (rank=1/24)

Scientific Publication

ICFCA 2017

Int. Congress on Formal Concept Analysis (acceptance rate 30%). L. Bourneuf, J. Nicolas ; FCA in a Logical Programming Setting for Visualization Oriented (Power) Graph Compression.
Best paper award. link.

Teaching & Science Popularization

Blog articles

popularization, opinions, project presentation

• bioinfo-fr.net: git tutorial, parsing advices.
• personal blog

Teaching

git, python and java (master’s degree) (2015-2017)

git, network, graph theory (bachelor’s degree) (2017)

Movie

Participation to Science-en-Cour[t]s

Professional Experience

2015—2016

Internships (4 and 6 months) at INRIA-Bretagne in the DYLISS team on formal concept analysis, graph theory and constraint programming applied to biological data

supervisor: Dr. Jacques Nicolas

2012—2017

Participant to Hackathon Les 24h du code at Le Mans. rank=1 in 2017.

2014

Congress host at the CIGRÉ (international congress on electricity transport).

Technical Experience

Thesis related repositories

PowerGrASP: Power Graph compression implementation — Python, ASP

BubbleTools: Power Graph programmatic handling — Python

Clyngor: Embedding of ASP in Python — Python, ASP

rofetta: Convertion between the main contexts encoding of FCA — Python

navicept: Implementation of ASP-based lattice navigation in GUI — Python, ASP

Side projects

linear-choosens: efficient implementation of random selection of n elements in m — Python

Weldon: Programming education helper — Python

bfia: Meta-meta-heuristic validates unit tests with brainfuck — Python, C

graffunc: Graph of function — Python

ACCC: Compiler of whatever to whatever — Python

gerobust: Wrapper for robust geometry — Python, C

pynclose: Wrapper for nclose concept enumeration algorithm — Python, C

NeuralWorld: Binary neural networks simulation — Python, ASP

gravastre: N-Body simulation — C++, Qt, SPARQL

Constellations in 3D: automatic 3D visualizations of constellations — Python, gnuplot

SE-pioneers: Poc for asynchronous multiplayer for Space Engine — Python, gnuplot